There are 9 ligand heavy atoms Ligand center of coords (x y z): 12.9417777777778 0.422 22.6125555555556 useligsph not on Starting number of spheres from sph/sph cluster 0: 1294 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 938 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 938 Number of spheres polar: 434, nonpolar: 318, out of current total: 938 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 0.95254 24.84093 -11.31902 12.38447 11.59575 34.60441 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 244 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 184 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 12.9417777777778 0.422 22.6125555555556 Center point: 87 xyz: 13.12279 -0.06655 22.83878 After continuity checking, number of spheres is: 129 Spheres center of coords (x y z): 7.96018341085271 0.349588759689923 26.8825231782946 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 11.0476947001742 1.340329684001 25.25332321473 Average weighted-distance for final elimination is: 20.1723739968437 Final number of output spheres is: 120 Number of polar spheres: 47 Number of nonpolar spheres: 40 Number of spheres that are near neither polar nor nonpolar receptor atoms: 33 Final number of spheres that are from crystallographic ligand: 0