There are 15 ligand heavy atoms Ligand center of coords (x y z): 1.35413333333333 -0.1636 58.9570666666667 useligsph not on Starting number of spheres from sph/sph cluster 0: 1123 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 820 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 820 Number of spheres polar: 374, nonpolar: 277, out of current total: 820 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -10.64193 13.32616 -11.97307 11.77977 46.97251 70.68005 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 263 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 200 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 1.35413333333333 -0.1636 58.9570666666667 Center point: 47 xyz: 0.75300 -0.03012 58.96615 After continuity checking, number of spheres is: 147 Spheres center of coords (x y z): 5.14818068027211 2.10474 54.9836973469387 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 1.86693023255815 2.58163799383582 59.9284110395068 Average weighted-distance for final elimination is: 21.7848127003365 Final number of output spheres is: 120 Number of polar spheres: 46 Number of nonpolar spheres: 36 Number of spheres that are near neither polar nor nonpolar receptor atoms: 38 Final number of spheres that are from crystallographic ligand: 0