There are 25 ligand heavy atoms Ligand center of coords (x y z): 3.48028 4.06556 57.89876 useligsph not on Starting number of spheres from sph/sph cluster 0: 1628 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 1249 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1247 Number of spheres polar: 487, nonpolar: 503, out of current total: 1247 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -3.31256 15.44003 -7.69756 16.03250 45.94122 69.85606 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 400 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 312 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 3.48028 4.06556 57.89876 Center point: 309 xyz: 3.17613 4.24509 58.05728 After continuity checking, number of spheres is: 253 Spheres center of coords (x y z): 7.61062644268774 4.56014561264822 54.9935163636364 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 1.82796596568899 3.94763060320974 60.4108785279469 Average weighted-distance for final elimination is: 26.6599762178658 Final number of output spheres is: 120 Number of polar spheres: 48 Number of nonpolar spheres: 41 Number of spheres that are near neither polar nor nonpolar receptor atoms: 31 Final number of spheres that are from crystallographic ligand: 0