There are 12 ligand heavy atoms Ligand center of coords (x y z): 11.3711666666667 -1.28366666666667 23.9415 useligsph not on Starting number of spheres from sph/sph cluster 0: 1212 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 887 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 887 Number of spheres polar: 418, nonpolar: 291, out of current total: 887 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -0.61253 23.32878 -10.60156 10.68721 11.98829 35.93480 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 282 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 189 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 11.3711666666667 -1.28366666666667 23.9415 Center point: 93 xyz: 11.18169 -1.53800 23.38134 After continuity checking, number of spheres is: 147 Spheres center of coords (x y z): 7.69930530612245 1.06546870748299 26.9471785714286 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 10.8522383110687 0.863791269083967 26.4075364980916 Average weighted-distance for final elimination is: 20.4339869080958 Final number of output spheres is: 120 Number of polar spheres: 46 Number of nonpolar spheres: 34 Number of spheres that are near neither polar nor nonpolar receptor atoms: 40 Final number of spheres that are from crystallographic ligand: 0