There are 12 ligand heavy atoms Ligand center of coords (x y z): 11.3655 -1.24075 23.9646666666667 useligsph not on Starting number of spheres from sph/sph cluster 0: 1224 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 884 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 884 Number of spheres polar: 416, nonpolar: 301, out of current total: 884 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -0.61110 23.30929 -11.22770 10.58421 11.98942 35.96216 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 246 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 177 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 11.3655 -1.24075 23.9646666666667 Center point: 97 xyz: 11.27045 -1.65460 23.39352 After continuity checking, number of spheres is: 132 Spheres center of coords (x y z): 8.12425371212121 0.306375606060606 27.4349712878788 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 10.831815248566 0.721503107074568 26.4575659655832 Average weighted-distance for final elimination is: 18.8697042483604 Final number of output spheres is: 120 Number of polar spheres: 46 Number of nonpolar spheres: 38 Number of spheres that are near neither polar nor nonpolar receptor atoms: 36 Final number of spheres that are from crystallographic ligand: 0