usefragsph not on
There are 24 ligand heavy atoms
Ligand center of coords (x y z): 9.417625 1.192125 24.52275
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1832
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 886
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 886
Number of spheres polar: 321, nonpolar: 348, out of current total: 886
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -0.57850 18.83166 -8.71439 11.18701 14.53622 34.51023
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 435
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 369
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 343
Spheres center of coords (x y z): 6.7318064723032 1.15000670553936 27.2608811078717
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.33717174260664
Final number of output spheres is: 60
Number of polar spheres: 24
Number of nonpolar spheres: 19
Number of spheres that are near neither polar nor nonpolar receptor atoms: 17
Final number of spheres that are from crystallographic ligand: 24