usefragsph not on
There are 26 ligand heavy atoms
Ligand center of coords (x y z): 8.03223076923077 2.14461538461538 25.1591153846154
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1987
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 997
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 997
Number of spheres polar: 393, nonpolar: 394, out of current total: 997
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -1.94662 16.25049 -7.55977 12.09690 15.29475 35.15359
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 469
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 414
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 381
Spheres center of coords (x y z): 5.46296677165354 1.4737824671916 26.7976860367454
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.87119127916865
Final number of output spheres is: 60
Number of polar spheres: 17
Number of nonpolar spheres: 33
Number of spheres that are near neither polar nor nonpolar receptor atoms: 10
Final number of spheres that are from crystallographic ligand: 26