usefragsph not on
There are 12 ligand heavy atoms
Ligand center of coords (x y z): 11.2591666666667 -0.997666666666667 23.93225
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1243
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 677
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 677
Number of spheres polar: 285, nonpolar: 222, out of current total: 677
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 1.28689 18.55721 -9.44953 8.98607 13.93271 33.92434
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 310
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 255
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 234
Spheres center of coords (x y z): 8.27081670940172 0.58629188034188 27.1298066666667
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.26734215413119
Final number of output spheres is: 60
Number of polar spheres: 30
Number of nonpolar spheres: 23
Number of spheres that are near neither polar nor nonpolar receptor atoms: 7
Final number of spheres that are from crystallographic ligand: 12