usefragsph not on
There are 27 ligand heavy atoms
Ligand center of coords (x y z): 8.41511111111111 2.80944444444444 25.4292222222222
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2325
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1221
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1221
Number of spheres polar: 463, nonpolar: 465, out of current total: 1221
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -1.57192 16.74151 -7.07131 12.78283 15.45548 35.39247
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 578
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 482
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 471
Spheres center of coords (x y z): 6.35273256900212 2.19160743099788 27.3598135881104
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.95685914644302
Final number of output spheres is: 60
Number of polar spheres: 14
Number of nonpolar spheres: 25
Number of spheres that are near neither polar nor nonpolar receptor atoms: 21
Final number of spheres that are from crystallographic ligand: 27