usefragsph not on
There are 27 ligand heavy atoms
Ligand center of coords (x y z): 8.03525925925926 2.44788888888889 25.543962962963
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1812
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1069
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1069
Number of spheres polar: 397, nonpolar: 413, out of current total: 1069
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -1.94615 17.26222 -7.41778 12.44130 15.54400 35.52947
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 542
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 437
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 407
Spheres center of coords (x y z): 5.14202783783783 1.79053825552825 27.3779257248157
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.08614531429589
Final number of output spheres is: 60
Number of polar spheres: 18
Number of nonpolar spheres: 31
Number of spheres that are near neither polar nor nonpolar receptor atoms: 11
Final number of spheres that are from crystallographic ligand: 27