usefragsph not on
There are 27 ligand heavy atoms
Ligand center of coords (x y z): 7.91111111111111 2.88203703703704 25.5196296296296
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2223
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1093
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1093
Number of spheres polar: 377, nonpolar: 438, out of current total: 1093
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -2.08571 16.81347 -6.53400 12.87278 15.53170 35.47262
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 326
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 252
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 241
Spheres center of coords (x y z): 5.94903074688796 2.13234468879668 27.4414229875519
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.90178092822263
Final number of output spheres is: 45
Number of polar spheres: 6
Number of nonpolar spheres: 19
Number of spheres that are near neither polar nor nonpolar receptor atoms: 20
Final number of spheres that are from crystallographic ligand: 27