usefragsph not on
There are 27 ligand heavy atoms
Ligand center of coords (x y z): 9.26196296296296 1.44485185185185 27.5732962962963
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1886
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 842
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 842
Number of spheres polar: 272, nonpolar: 389, out of current total: 842
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -0.73798 18.30850 -8.50718 11.44229 17.60024 37.54543
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 403
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 346
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 316
Spheres center of coords (x y z): 6.3604303164557 1.78210762658228 27.794898164557
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.80500007313988
Final number of output spheres is: 60
Number of polar spheres: 11
Number of nonpolar spheres: 40
Number of spheres that are near neither polar nor nonpolar receptor atoms: 9
Final number of spheres that are from crystallographic ligand: 27