usefragsph not on
There are 17 ligand heavy atoms
Ligand center of coords (x y z): 10.4924117647059 13.1073529411765 44.3812352941176
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1467
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 983
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 983
Number of spheres polar: 362, nonpolar: 456, out of current total: 983
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 0.58242 20.38098 3.18688 23.10704 34.40983 54.37856
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 501
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 401
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 257
Spheres center of coords (x y z): 11.7239288326848 15.6720386381323 41.3020437743191
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.78652837452877
Final number of output spheres is: 60
Number of polar spheres: 31
Number of nonpolar spheres: 22
Number of spheres that are near neither polar nor nonpolar receptor atoms: 7
Final number of spheres that are from crystallographic ligand: 17