usefragsph not on
There are 26 ligand heavy atoms
Ligand center of coords (x y z): 12.1896538461538 14.0051153846154 34.4459230769231
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2043
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1052
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1052
Number of spheres polar: 340, nonpolar: 425, out of current total: 1052
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 2.23396 22.17762 4.00927 23.98860 24.45850 44.44000
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 320
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 263
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 226
Spheres center of coords (x y z): 13.2908585840708 17.0690047345133 37.0642553539823
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.30539990547936
Final number of output spheres is: 45
Number of polar spheres: 12
Number of nonpolar spheres: 22
Number of spheres that are near neither polar nor nonpolar receptor atoms: 11
Final number of spheres that are from crystallographic ligand: 26