usefragsph not on
There are 27 ligand heavy atoms
Ligand center of coords (x y z): 12.3035185185185 14.571 34.9810740740741
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2080
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1200
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1200
Number of spheres polar: 409, nonpolar: 460, out of current total: 1200
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 2.33153 22.30205 4.75684 24.55479 24.98492 44.96066
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 648
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 505
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 458
Spheres center of coords (x y z): 13.3941541266375 17.0302007860262 37.001121048035
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.82557463311343
Final number of output spheres is: 60
Number of polar spheres: 19
Number of nonpolar spheres: 26
Number of spheres that are near neither polar nor nonpolar receptor atoms: 15
Final number of spheres that are from crystallographic ligand: 27