usefragsph not on
There are 26 ligand heavy atoms
Ligand center of coords (x y z): 11.7171923076923 13.7115 34.8642692307692
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2013
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1096
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1096
Number of spheres polar: 318, nonpolar: 482, out of current total: 1096
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 3.38968 21.71270 3.75469 23.68642 25.11820 44.84000
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 564
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 495
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 491
Spheres center of coords (x y z): 13.411533808554 15.4551913645621 37.4023045213849
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.71264898376942
Final number of output spheres is: 60
Number of polar spheres: 14
Number of nonpolar spheres: 27
Number of spheres that are near neither polar nor nonpolar receptor atoms: 19
Final number of spheres that are from crystallographic ligand: 26