usefragsph not on
There are 27 ligand heavy atoms
Ligand center of coords (x y z): 8.5047037037037 2.40207407407407 25.3095555555556
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1913
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1100
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1100
Number of spheres polar: 424, nonpolar: 437, out of current total: 1100
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -1.47560 17.34147 -7.45225 12.38370 15.33727 35.27802
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 321
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 256
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 235
Spheres center of coords (x y z): 5.3664909787234 1.39253123404255 26.5941189361702
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.33778919667561
Final number of output spheres is: 45
Number of polar spheres: 13
Number of nonpolar spheres: 20
Number of spheres that are near neither polar nor nonpolar receptor atoms: 12
Final number of spheres that are from crystallographic ligand: 27