usefragsph not on
There are 29 ligand heavy atoms
Ligand center of coords (x y z): 8.48034482758621 2.73403448275862 25.4746896551724
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2180
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1068
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1068
Number of spheres polar: 342, nonpolar: 449, out of current total: 1068
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -1.50853 17.14808 -6.53060 12.70976 15.48176 35.46670
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 312
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 246
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 235
Spheres center of coords (x y z): 6.19485119148936 2.0573075319149 27.3263401702128
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.81410365527117
Final number of output spheres is: 45
Number of polar spheres: 6
Number of nonpolar spheres: 17
Number of spheres that are near neither polar nor nonpolar receptor atoms: 22
Final number of spheres that are from crystallographic ligand: 29