usefragsph not on
There are 26 ligand heavy atoms
Ligand center of coords (x y z): 8.3775 2.7425 25.4324230769231
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2353
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1170
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1170
Number of spheres polar: 435, nonpolar: 459, out of current total: 1170
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -1.61657 16.43795 -5.55675 12.73255 15.53738 35.43002
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 556
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 473
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 459
Spheres center of coords (x y z): 6.02668697167756 1.9518622875817 27.5375137908497
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.76007471498917
Final number of output spheres is: 60
Number of polar spheres: 13
Number of nonpolar spheres: 25
Number of spheres that are near neither polar nor nonpolar receptor atoms: 22
Final number of spheres that are from crystallographic ligand: 26