usefragsph not on
There are 23 ligand heavy atoms
Ligand center of coords (x y z): 59.748 30.8797391304348 46.5274347826087
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1445
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 870
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 868
Number of spheres polar: 159, nonpolar: 528, out of current total: 868
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 49.75266 69.72973 20.99260 40.79062 38.67318 56.33197
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 465
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 408
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 402
Spheres center of coords (x y z): 58.3284517661691 28.9240583333333 48.7537865920398
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.67760727555197
Final number of output spheres is: 60
Number of polar spheres: 20
Number of nonpolar spheres: 40
Number of spheres that are near neither polar nor nonpolar receptor atoms: 0
Final number of spheres that are from crystallographic ligand: 23