usefragsph not on
There are 36 ligand heavy atoms
Ligand center of coords (x y z): -39.9803055555556 64.2014444444444 34.1880277777778
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2107
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1041
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1037
Number of spheres polar: 145, nonpolar: 686, out of current total: 1037
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -49.97190 -30.02726 54.55396 74.19883 24.32311 44.17007
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 343
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 295
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 266
Spheres center of coords (x y z): -40.1048463533835 67.346817556391 34.8794137218045
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.81506370810447
Final number of output spheres is: 45
Number of polar spheres: 8
Number of nonpolar spheres: 32
Number of spheres that are near neither polar nor nonpolar receptor atoms: 5
Final number of spheres that are from crystallographic ligand: 36