usefragsph not on
There are 25 ligand heavy atoms
Ligand center of coords (x y z): 26.36508 11.22196 27.02348
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1519
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1068
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1059
Number of spheres polar: 352, nonpolar: 440, out of current total: 1059
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 16.50796 36.34321 2.39887 21.13900 18.20967 36.94118
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 522
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 441
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 435
Spheres center of coords (x y z): 27.0819655862069 12.580315862069 28.4563446206897
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.59434643082828
Final number of output spheres is: 60
Number of polar spheres: 28
Number of nonpolar spheres: 23
Number of spheres that are near neither polar nor nonpolar receptor atoms: 9
Final number of spheres that are from crystallographic ligand: 25