Distance from surface specified: 1.80 There are 25 ligand heavy atoms Ligand center of coords (x y z): 26.36508 11.22196 27.02348 Using crystallographic ligand as spheres for output Starting number of spheres from sph/sph cluster 0: 12570 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (14 angstroms): 11048 WARNING: removing a crystallographic sphere that is distance 1.74799456520894 angstroms from closest receptor atom Number of spheres after removing too far (>7 angstroms) and too close to receptor (<2 angstroms): 10502 Number of spheres polar: 6467, nonpolar: 2987, out of current total: 10502 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 12.45680 40.36140 -2.76520 25.13980 13.03140 40.99560 Number of spheres after removing spheres too close to each other (approximately <1.4 angstroms): 1398 Number of spheres after second pass removing spheres absolutely <0.9 from each other: 671 Crystallographic spheres are present, so doing continuity based on crystallographic spheres After continuity checking, number of spheres is: 662 Spheres center of coords (x y z): 27.9132761329305 13.0005749244713 29.885832326284 Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8) Average weighted-distance for final elimination is: 11.5779208248927 Final number of output spheres is: 200 Number of polar spheres: 115 Number of nonpolar spheres: 73 Number of spheres that are near neither polar nor nonpolar receptor atoms: 12 Final number of spheres that are from crystallographic ligand: 24