There are 25 ligand heavy atoms Ligand center of coords (x y z): 26.36508 11.22196 27.02348 Using crystallographic ligand as spheres for output Starting number of spheres from sph/sph cluster 0: 12570 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 8857 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 8814 Number of spheres polar: 5504, nonpolar: 2468, out of current total: 8814 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 14.36880 38.35640 -0.75660 23.22060 15.02640 39.01680 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 1160 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 558 Crystallographic spheres are present, so doing continuity based on crystallographic spheres After continuity checking, number of spheres is: 552 Spheres center of coords (x y z): 27.0820061594203 13.2819083333333 29.8051123188406 Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8) Average weighted-distance for final elimination is: 10.225047703574 Final number of output spheres is: 120 Number of polar spheres: 70 Number of nonpolar spheres: 42 Number of spheres that are near neither polar nor nonpolar receptor atoms: 8 Final number of spheres that are from crystallographic ligand: 25