There are 24 ligand heavy atoms Ligand center of coords (x y z): 40.2131666666667 46.8475 1.20320833333333 useligsph not on Starting number of spheres from sph/sph cluster 0: 1372 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 999 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 999 Number of spheres polar: 290, nonpolar: 496, out of current total: 999 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 28.24071 52.08688 34.87566 58.83547 -8.70411 13.19922 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 362 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 289 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 40.2131666666667 46.8475 1.20320833333333 Center point: 193 xyz: 39.92865 46.56264 0.97124 After continuity checking, number of spheres is: 228 Spheres center of coords (x y z): 40.476371622807 51.1449835964912 0.175614605263158 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 35.1612308478038 41.2667936670071 3.89387946884577 Average weighted-distance for final elimination is: 27.8657519260845 Final number of output spheres is: 120 Number of polar spheres: 40 Number of nonpolar spheres: 56 Number of spheres that are near neither polar nor nonpolar receptor atoms: 24 Final number of spheres that are from crystallographic ligand: 0