usefragsph not on
There are 33 ligand heavy atoms
Ligand center of coords (x y z): 31.6897878787879 120.162909090909 10.5807878787879
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1901
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 925
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 923
Number of spheres polar: 253, nonpolar: 480, out of current total: 923
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 21.77555 41.58467 110.16559 129.90916 0.59141 20.56831
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 491
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 415
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 338
Spheres center of coords (x y z): 31.2823368934911 121.107434289941 8.60670615384615
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.64343468020282
Final number of output spheres is: 60
Number of polar spheres: 17
Number of nonpolar spheres: 40
Number of spheres that are near neither polar nor nonpolar receptor atoms: 3
Final number of spheres that are from crystallographic ligand: 33