There are 33 ligand heavy atoms Ligand center of coords (x y z): 1.43963636363636 67.0150606060606 83.5295151515152 Using crystallographic ligand as spheres for output Starting number of spheres from sph/sph cluster 0: 14427 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 10299 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 10299 Number of spheres polar: 4819, nonpolar: 3943, out of current total: 10299 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -10.53460 13.43920 55.01700 79.01340 71.53060 95.52900 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 1135 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 675 Crystallographic spheres are present, so doing continuity based on crystallographic spheres After continuity checking, number of spheres is: 555 Spheres center of coords (x y z): 2.19912468468469 70.8720803603604 79.9615837837838 Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8) Average weighted-distance for final elimination is: 8.28108980752643 Final number of output spheres is: 120 Number of polar spheres: 43 Number of nonpolar spheres: 61 Number of spheres that are near neither polar nor nonpolar receptor atoms: 16 Final number of spheres that are from crystallographic ligand: 33