MakeDOCK 2.0, modified by J.Irwin and M.Mysinger. Previous versions by D.M.Lorber, B.Q.Wei, A.N.Kirschner, and N.Huang Using scripts in /raid5/people/mysinger/xyz/dockenv. Creating binding-site residue list Creating molecular surface real 0m32.595s user 0m0.591s sys 0m0.335s Creating sphgen spheres Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 0:2173 spheres. 400. 400. 401. 401. 401. 401. 402. 403. 403. 403. 403. 403. 403. 404. 404. 404. 404. 404. 404. 404. 404. 404. 404. 404. 404. 404. 404. 408. 409. 409. 409. 409. 409. 409. 409. 409. 409. 409. 409. 409. 409. 409. 409. 410. 410. 410. 410. 410. 410. 410. 410. 426. 426. 426. 426. 427. 427. 427. 427. 427. 427. 427. 427. 427. 427. 427. 427. 427. 427. 428. 428. 428. 428. 428. 428. 428. 428. 428. 428. 428. 428. 428. 428. 428. 428. 428. 428. 428. 428. 428. 428. 428. 428. 428. 428. 428. 428. 428. 428. 428. 428. 428. 428. 428. 428. 428. 428. 428. 428. 428. 429. 429. 429. 429. 429. 429. 429. 429. 429. 429. 429. 429. 429. 429. 429. 429. 429. 429. 429. 429. 429. 429. 429. 429. 429. 429. 429. 429. 429. 429. 429. 429. 429. 431. 431. 431. 434. 434. 434. 434. 434. 434. 434. 434. 434. 436. 436. 436. 437. 437. 437. 437. 437. 437. 437. 437. 437. 437. 437. 437. 437. 438. 438. 438. 438. 438. 438. 438. 438. 438. 438. 438. 438. 439. 439. 444. 444. 444. 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633. 633. 633. 633. 633. 638. 641. 641. 641. 641. 646. 646. 647. 647. 647. 647. 647. 647. 647. 647. 648. 648. 648. 648. 648. 649. 649. 651. 651. 651. 652. 652. 652. 652. 652. 652. 652. 652. 652. 652. 655. 657. 657. 657. 658. 659. 659. 659. 659. 659. 659. 659. 659. 659. 659. 659. 659. 659. 659. 659. 659. 659. 659. 659. 659. 659. 659. 660. 660. 660. 660. 660. 660. 660. 660. 660. 660. 660. 660. 660. 660. 660. 660. 660. 660. 660. 660. 660. 660. 662. 662. 666. 666. 666. 666. 666. 666. 666. 666. 667. 667. 667. 667. 667. 667. 667. 667. 667. 667. 667. 667. 667. 667. 667. 667. 667. 667. 667. 672. 672. 672. 672. 672. 672. 672. 672. 674. 674. 674. 674. 675. 682. 682. 682. 682. 682. 682. 686. 687. 687. 687. 687. 687. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 689. 689. 691. 696. 696. 696. 696. 696. 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706.1251.1251.1251.1251.1251.1251.1251.1251.1258.1258.1259.1259.1259.1259.1259.1259.1259.1259.1259.1259.1259.1261.1261.1261.1261.1261.1264.1264.1264.1264.1265.1266.1266.1266.1266.1267.1267.1267.1267.1267.1267.1267.1267.1267.1267.1267.1268.1269.1270.1271.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1279.1281.1281.1373.1373.1375.1375.1375.1378.1378.1378.1378.1378.1409.1409.1412.1412.1412.1414.1414.1414.1414.1414.1414.1414.1414.1414.1414.1414.1414.1414.1414.1414.1414.1416.1416.1416.1416.1416.1416.1416.1416.1416.1416.1416.1416.1416.1420.2400.2407.2408.2408.2408.2413.2413.2413.2413.2413.2413.2413.2414.2414.2414.2414.2414.2414.2414.2414.2414.2414.2414.2414.2414.2414.2414.2414.2414.2414.2416.2417.2417.2417.2417.2417.2417.2417.2417.2417.2417.2417.2417.2417.2417.2417.2417.2418.2418.2418.2418.2420.2420.2420.2422.2423.2423.2424.2424.2424.2424.2424.2424.2424.2424.2424.2424.2424.2424.2424.2424.2424.2424.2424.2424.2424.2425.2425.2425.2425.2425.2425.2425.2425.2425.2426.2426.2426.2426.2426.2426.2426.2426.2426.2426.2426.2426.2426.2426.2426.2426.2426.2426.2426.2426.2426.2426.2426.2426.2426.2426.2426.2427.2427.2427.2427.2444.2444.2444.2445.2445.2445.2445.2445.2445.2445.2445.2445.2445.2445.2445.2445.2445.2445.2445.2445.2445.2445.2445.2445.2445.2445.2445.2445.2445.2445.2445.2445.2445.2445.2445.2445.2445.2445.2445.2445.2445.2445.2446.2446.2446.2446.2446.2452.2452.2452.2452.2452.2452.2452.2452.2452.2452.2452.2452.2452.2452.2452.2452.2453.2453.2453.2453.2453.2455.2455.2455.2455.2455.2457.2457.2457.2460.2460.2460.2460.2460.2460.2460.2460.2460.2460.2460.2462.2462.2463.2463.2463.2463.2463.2463.2463.2463.2463.2463.2463.2463.2468.2472.2472.2472.2472.2472.2472.2472.2472.2472.2472.2472.2472.2472.2472.2474.2474.2474.2474.2474.2474.2474.2474.2474.2474.2474.2474.2474.2474.2474.2474.2474.2474.2475.2475.2475.2475.2475.2475.2475.2476.2476.2476.2476.2476.2477.2477.2477.2477.2477.2477.2477.2477.2477.2477.2477.2477.2480.2480.2480.2480.2480.2480.2480.2480.2480.2480.2480.2480.2480.2480.2480.2480.2480.2480.2480.2480.2480.2480.2480.2480.2480.2480.2481.2481.2481.2481.2482.2482.2486.2486.2486.2486.2491.2491.2491.2491.2491.2491.2491.2491.2491.2491.2491.2491.2492.2492.2492.2493.2493.2493.2493.2494.2494.2494.2494.2494.2494.2494.2494.2494.2494.2494.2494.2494.2494.2494.2494.2494.2496.2497.2497.2497.2498.2498.2498.2501.2501.2501.2503.2503.2503.2503.2503.2503.2503.2503.2503.2503.2503.2503.2503.2503.2503.2503.2503.2503.2503.2503.2503.2503.2503.2503.2503.2503.2504.2504.2505.2505.2505.2505.2505.2505.2505.2505.2505.2505.2505.2505.2505.2511.2511.2513.2517.2519.2519.2519.2519.2519.2519.2519.2519.2520.2520.2520.2520.2520.2520.2520.2520.2520.2520.2521.2521.2521.2521.2521.2521.2521.2521.2526.2529.2529.2529.2529.2529.2529.2529.2529.2537.2537.2538.2538.2538.2538.2538.2538.2538.2538.2539.2539.2541.2543.2543.2543.2543.2543.2543.2543.2543.2543.2547.2547.2547.2547.2547.2547.2547.2547.2547.2551.2553.2556.2556.2557.2557.2558.2558.2558.2558.2558.2578.2578.2580.2582.2582.2582.2582.2582.2582.2707.2707.2707.2707.2719.2719.2719.2719.2719.2720.2721.2722.2722.2722.2727.2727.2727.2727.2729.2729.2729.2729.2729.2729.2729.2729.2729.2729.2736.2736.2736.2736.2736.2736.2736.2736.2736.2736.2736.2736.2736.2739.2739.2739.2739.2739.2739.2739.2739.2739.2739.2739.2739.2739.2739.2739.2739.2739.2739.2739.2739.2739.2739.2739.2739.2739.2739.2739.2739.2739.2747.2747.2747.2756.2756.2756.2756.2756.2767.2767.2768.2768.2768.2768.2768.2768.2768.2768.2769.2769.2769.2769.2769.2769.2769.2769.2769.2769.2769.2781.2781.2781.2781.2781.2781.2781.2781.2781.2783.2783.2783.3132.3132.3133.3133.3134.3134.3134.3136.3136.3136.3136.3136.3136.3136.3136.3136.3136.3136.3136.3136.3136.3136.3136.3136.3136.3136.3136.3140.3140.3140.3140.3140.3140.3750.3750.3750.3750.3750.3750.3750.3750.3750.3750.3750.3750.3750.3750.3750.3750.3750.3752.3752.3752.3753.3753.3753.3753.3754.3754.3754.3754.3755.3755.3755.3755.3756.3756.3756.3756.3756.3756.3756.3756.3756.3756.3756.3756.3756.3756.3756.3756.3756.3756.3756.3756.3756.3756.3756.3756.3756.3756.3756.3756.3756.3756.3756.3756.3756.3756.3756.3756.3756.3756.3756.3757.3757.3757.3757.3757.3757.3757.3758.3758.3758.3760.3760.3761.3761.3761.3761.3761.3761.3761.3762.3762.3765.3771.3771.3771.3771.3771.3771.3771.3771.3771.3771.3772.3772.3775.3777.3777.3777.3777.3777.3777.3777.3777.3777.3777.3777.3777.3777.3778.3778.3778.3778.3778.3778.3778.3778.3778.3778.3778.3778.3778.3778.3778.3778.3778.3778.3778.3778.3778.3778.3778.3778.3778.3779.3779.3779.3779.3779.3779.3779.3779.3779.3779.3779.3779.3779.3779.3779.3779.3779.3779.3779.3779.3779.3779.3779.3779.3779.3779.3779.3779.3779.3779.3779.3779.3780.3780.3780.3780.3780.3780.3780.3780.3780.3780.3780.3780.3780.3780.3780.3780.3780.3780.3780.3780.3780.3780.3780.3780.3780.3781.3781.3781.3782.3782.3782.3782.3784.3784.3784.3784.3784.3784.3784.3784.3784.3785.3785.3785.3785.3785.3785.3785.3785.3785.3785.3785.3785.3785.3785.3785.3785.3785.3785.3785.3785.3785.3785.3785.3786.3786.3786.3786.3786.3786.3787.3787.3787.3787.3787.3787.3787.3787.3787.3788.3788.3788.3788.3788.3788.3793.3793.3793.3793.3793.3801.3810.3810.3810.3812.3812.3812.3812.3812.3812.3812.3812.3812.3812.3812.3813.3813.3813.3813.3813.3818.3822.3822.3822.3822.3822.3822.3822.3822.3822.3822.3822.3822.3824.3824.3825.3825.3825.3825.3825.3825.3825.3825.3825.3825.3826.3836.3836.3838.3839.3842.3842.3842.3842.3846.3846.3846.3846.3846.3846.3846.3847.3847.3847.3847.3847.3847.3847.3847.3847.3847.3847.3847.3847.3847.3847.3847.3847.3847.3847.3847.3847.3847.3847.3847.3847.3847.3847.3847.3848.3848.3848.3848.3848.3848.3848.3848.3848.3848.3850.3852.3852.3852.3855.3855.3856.3856.3856.3856.3856.3856.3856.3856.3856.3856.3856.3856.3856.3856.3856.3856.3856.3856.3856.3856.3856.3856.3856.3856.3856.3856.3856.3856.3856.3856.3856.3856.3857.3857.3857.3857.3857.3857.3857.3857.3857.3857.3857.3857.3857.3857.3862.3862.3862.3862.3867.3867.3867.3867.3867.3867.3867.3867.3867.3867.3867.3867.3867.3867.3867.3867.3868.3868.3868.3868.3868.3868.3868.3868.3868.3871.3871.3871.3871.3871.3871.3871.3871.3871.3871.3871.3874.3874.3874.3874.3874.3874.3874.3874.3874.3874.3874.3880.3880.3880.3880.3880.3880.3880.3885.3885.3885.3889.3889.3889.3889.3889.3889.3889.3889.3889.3889.3889.3889.3889.3890.3894.3897.3897.3897.3897.3897.3898.3898.3898.3898.3898.3898.3898.3898.3898.3903.3904.3904.3905.3905.3906.3906.3906.3906.3906.3906.3906.3906.3906.3906.3906.3906.3906.3906.3906.3906.3906.3906.3906.3906.3906.3906.3906.3906.3906.3906.3911.3911.3911.3911.3911.3911.3911.3912.3913.3913.3913.3913.3913.3913.3917.3917.3917.3917.3917.3917.3917.3917.3917.3917.3917.3917.3917.3917.3917.3917.3917.3917.3917.3917.3917.3917.3917.3917.3917.3918.3919.3919.3919.3919.3919.3919.3919.3926.3926.3926.3926.3926.3926.3926.3926.3926.3926.3926.3927.3927.3927.3932.3932.3932.3932.3932.3932.3935.3935.3935.5509.5509.5509.5516.5516.5516.5516.5516.5516.5517.5517.5517.5517.5517.5519.5519.5519.5519.5519.5519.5519.5519.5519.5519.5519.5519.5519.5519.5519.5519.5519.5520.5520.5520.5520.5520.5520.5520.5521.5521.5521.5521.5521.5526.5526.5526.5526.5526.5526.5526.5526.5526.5526.5526.5526.5526.5526.5542.5542.5542.5542.5542.5542.5543.5543.5543.5544.5545.5545.5545.5545.5545.5545.5545.5546.5546.5559.5559.5560.5562.5562.5562.5562.5562.5562.5563.5564.5564.5564.5564.5564.5569.5569.5569.5570.5570.5576.5578.5578.5578.5578.5578.5578.5578.5578.5578.5578.5578.5578.5578.5578.5578.5578.5578.5578.5578.5583.5583.5583.5583.5583.5583.5583.5583.5583.5583.5583.5583.5583.5583.5583.5583.5583.5584.5584.5584.5584.5585.5585.5585.5585.5586.5586.5587.5587.5587.5587.5587.5587.5587.5587.5587.5587.5587.5587.5588.5588.5588.5588.5588.5588.5588.FORTRAN STOP Converting ligand atoms to spheres Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 1: 30 spheres. 1. 2. 3. 4. 5. 6. 7. 8. 9. 10. 11. 12. 13. 14. 15. 16. 17. 18. 19. 20. 21. 22. 23. 24. 25. 26. 27. 28. 29. 30.FORTRAN STOP Adding essential hydrogens to receptor Adding all-atom hydrogens... Working on structure 1 Pre-treating metals... Done treating metals Adding hydrogens... Treating metals... Creating di-sulfur bonds... Created a bond between residue(P:16) and residue(P:5); changed residue names to "CYX " Created a bond between residue(P:26) and residue(P:10); changed residue names to "CYX " Created a bond between residue(P:38) and residue(P:28); changed residue names to "CYX " Created a bond between residue(P:128) and residue(P:6); changed residue names to "CYX " Created a bond between residue(P:544) and residue(P:538); changed residue names to "CYX " Created a bond between residue(P:579) and residue(P:563); changed residue names to "CYX " Created a bond between residue(P:591) and residue(P:581); changed residue names to "CYX " Finding het groups... Coloring atoms by element (green carbons in hets)... Running ProtAssign... using exhaustive mode will sample waters done with preparation Writing to file... DONE. Output file: rec.mae Removing non-polar hydrogens... WARNING mmpdb_write: more than 4 bonds for atom ( C1A) in residue 1107 (HEM ), chain 'P'. WARNING mmpdb_write: more than 4 bonds for atom ( C2A) in residue 1107 (HEM ), chain 'P'. WARNING mmpdb_write: more than 4 bonds for atom ( C3A) in residue 1107 (HEM ), chain 'P'. WARNING mmpdb_write: more than 4 bonds for atom ( C4A) in residue 1107 (HEM ), chain 'P'. WARNING mmpdb_write: more than 4 bonds for atom ( CGA) in residue 1107 (HEM ), chain 'P'. WARNING mmpdb_write: more than 4 bonds for atom ( C1B) in residue 1107 (HEM ), chain 'P'. WARNING mmpdb_write: more than 4 bonds for atom ( C2B) in residue 1107 (HEM ), chain 'P'. WARNING mmpdb_write: more than 4 bonds for atom ( C3B) in residue 1107 (HEM ), chain 'P'. WARNING mmpdb_write: more than 4 bonds for atom ( C4B) in residue 1107 (HEM ), chain 'P'. WARNING mmpdb_write: more than 4 bonds for atom ( C1C) in residue 1107 (HEM ), chain 'P'. WARNING mmpdb_write: more than 4 bonds for atom ( C2C) in residue 1107 (HEM ), chain 'P'. WARNING mmpdb_write: more than 4 bonds for atom ( C3C) in residue 1107 (HEM ), chain 'P'. WARNING mmpdb_write: more than 4 bonds for atom ( C4C) in residue 1107 (HEM ), chain 'P'. WARNING mmpdb_write: more than 4 bonds for atom ( C1D) in residue 1107 (HEM ), chain 'P'. WARNING mmpdb_write: more than 4 bonds for atom ( C2D) in residue 1107 (HEM ), chain 'P'. WARNING mmpdb_write: more than 4 bonds for atom ( C3D) in residue 1107 (HEM ), chain 'P'. WARNING mmpdb_write: more than 4 bonds for atom ( C4D) in residue 1107 (HEM ), chain 'P'. WARNING mmpdb_write: more than 4 bonds for atom ( CGD) in residue 1107 (HEM ), chain 'P'. WARNING mmpdb_write: more than 4 bonds for atom (FE ) in residue 1107 (HEM ), chain 'P'. WARNING mmpdb_write: more than 4 bonds for atom ( C1A) in residue 1107 (HEM ), chain 'P'. WARNING mmpdb_write: more than 4 bonds for atom ( C2A) in residue 1107 (HEM ), chain 'P'. WARNING mmpdb_write: more than 4 bonds for atom ( C3A) in residue 1107 (HEM ), chain 'P'. WARNING mmpdb_write: more than 4 bonds for atom ( C4A) in residue 1107 (HEM ), chain 'P'. WARNING mmpdb_write: more than 4 bonds for atom ( CGA) in residue 1107 (HEM ), chain 'P'. WARNING mmpdb_write: more than 4 bonds for atom ( C1B) in residue 1107 (HEM ), chain 'P'. WARNING mmpdb_write: more than 4 bonds for atom ( C2B) in residue 1107 (HEM ), chain 'P'. WARNING mmpdb_write: more than 4 bonds for atom ( C3B) in residue 1107 (HEM ), chain 'P'. WARNING mmpdb_write: more than 4 bonds for atom ( C4B) in residue 1107 (HEM ), chain 'P'. WARNING mmpdb_write: more than 4 bonds for atom ( C1C) in residue 1107 (HEM ), chain 'P'. WARNING mmpdb_write: more than 4 bonds for atom ( C2C) in residue 1107 (HEM ), chain 'P'. WARNING mmpdb_write: more than 4 bonds for atom ( C3C) in residue 1107 (HEM ), chain 'P'. WARNING mmpdb_write: more than 4 bonds for atom ( C4C) in residue 1107 (HEM ), chain 'P'. WARNING mmpdb_write: more than 4 bonds for atom ( C1D) in residue 1107 (HEM ), chain 'P'. WARNING mmpdb_write: more than 4 bonds for atom ( C2D) in residue 1107 (HEM ), chain 'P'. WARNING mmpdb_write: more than 4 bonds for atom ( C3D) in residue 1107 (HEM ), chain 'P'. WARNING mmpdb_write: more than 4 bonds for atom ( C4D) in residue 1107 (HEM ), chain 'P'. WARNING mmpdb_write: more than 4 bonds for atom ( CGD) in residue 1107 (HEM ), chain 'P'. WARNING mmpdb_write: more than 4 bonds for atom (FE ) in residue 1107 (HEM ), chain 'P'. Renaming polar hydrogens... Generating matching spheres for delphi Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 1: 120 spheres. 9001.9002.9003.9004.9005.9006.9007.9008.9009.9010.9011.9012.9013.9014.9015.9016.9017.9018.9019.9020.9021.9022.9023.9024.9025.9026.9027.9028.9029.9030.9031.9032.9033.9034.9035.9036.9037.9038.9039.9040.9041.9042.9043.9044.9045.9046.9047.9048.9049.9050.9051.9052.9053.9054.9055.9056.9057.9058.9059.9060.9061.9062.9063.9064.9065.9066.9067.9068.9069.9070.9071.9072.9073.9074.9075.9076.9077.9078.9079.9080.9081.9082.9083.9084.9085.9086.9087.9088.9089.9090.9091.9092.9093.9094.9095.9096.9097.9098.9099.9100.9101.9102.9103.9104.9105.9106.9107.9108.9109.9110.9111.9112.9113.9114.9115.9116.9117.9118.9119.9120.FORTRAN STOP Generating faster matching2 spheres for docking Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 1: 45 spheres. 9001.9002.9003.9004.9005.9006.9007.9008.9009.9010.9011.9012.9013.9014.9015.9016.9017.9018.9019.9020.9021.9022.9023.9024.9025.9026.9027.9028.9029.9030.9031.9032.9033.9034.9035.9036.9037.9038.9039.9040.9041.9042.9043.9044.9045.FORTRAN STOP Coloring matching spheres Generating slower matching3 spheres for docking Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 1: 60 spheres. 9001.9002.9003.9004.9005.9006.9007.9008.9009.9010.9011.9012.9013.9014.9015.9016.9017.9018.9019.9020.9021.9022.9023.9024.9025.9026.9027.9028.9029.9030.9031.9032.9033.9034.9035.9036.9037.9038.9039.9040.9041.9042.9043.9044.9045.9046.9047.9048.9049.9050.9051.9052.9053.9054.9055.9056.9057.9058.9059.9060.FORTRAN STOP Coloring matching spheres Adding spheres to electrostatic grid Creating DelPhi electrostatic grid real 1m14.258s user 0m25.746s sys 0m0.810s Adding spheres to tarted electrostatic grid we had to cook * NE2* we had to cook *HNE2* we had to cook *HNE1* Creating DelPhi electrostatic grid real 0m47.836s user 0m27.321s sys 0m0.738s Creating box around spheres Creating chemgrid maps real 0m31.469s user 0m16.312s sys 0m0.240s Atomic solvent excluded volume calculations underway FORTRAN STOP real 33m33.535s user 17m9.412s sys 0m0.097s Checking for WARNINGS in OUTPARM. Checking for WARNINGS in delphi.log. !!! WARNING: ARG 48 has a net charge of 0.0400 !!! WARNING: ARG 52 has a net charge of 0.0400 !!! WARNING: LYS 138 has a net charge of 0.0200 !!! WARNING: GLN 139 has a net charge of 0.0170 !!! WARNING: ASP 142 has a net charge of -0.2080 !!! WARNING: LYS 155 has a net charge of 0.0200 !!! WARNING: LYS 184 has a net charge of 0.0200 !!! WARNING: LYS 286 has a net charge of 0.0200 !!! WARNING: HIZ 357 has a net charge of 0.2000 !!! WARNING: ARG 365 has a net charge of 0.0400 !!! WARNING: GLN 369 has a net charge of 0.0170 !!! WARNING: ASP 385 has a net charge of -0.2080 !!! WARNING: LYS 442 has a net charge of 0.0200 !!! WARNING: GLN 448 has a net charge of 0.0170 !!! WARNING: LYS 454 has a net charge of 0.0200 !!! WARNING: ARG 601 has a net charge of 0.0400 !!! WARNING: HEM 1107 has a net charge of -4.0000 !!! WARNING: ARG 48 has a net charge of 0.0400 !!! WARNING: ARG 52 has a net charge of 0.0400 !!! WARNING: LYS 138 has a net charge of 0.0200 !!! WARNING: GLN 139 has a net charge of 0.0170 !!! WARNING: ASP 142 has a net charge of -0.2080 !!! WARNING: LYS 155 has a net charge of 0.0200 !!! WARNING: LYS 184 has a net charge of 0.0200 !!! WARNING: LYS 286 has a net charge of 0.0200 !!! WARNING: HIZ 357 has a net charge of 0.2000 !!! WARNING: ARG 365 has a net charge of 0.0400 !!! WARNING: GLN 369 has a net charge of 0.0170 !!! WARNING: ASP 385 has a net charge of -0.2080 !!! WARNING: LYS 442 has a net charge of 0.0200 !!! WARNING: GLN 448 has a net charge of 0.0170 !!! WARNING: LYS 454 has a net charge of 0.0200 !!! WARNING: ARG 601 has a net charge of 0.0400 !!! WARNING: HEM 1107 has a net charge of -4.0000 !!! WARNING: ARG 48 has a net charge of 0.0400 !!! WARNING: ARG 52 has a net charge of 0.0400 !!! WARNING: LYS 138 has a net charge of 0.0200 !!! WARNING: GLN 139 has a net charge of 0.0170 !!! WARNING: ASP 142 has a net charge of -0.2080 !!! WARNING: LYS 155 has a net charge of 0.0200 !!! WARNING: LYS 184 has a net charge of 0.0200 !!! WARNING: LYS 286 has a net charge of 0.0200 !!! WARNING: HIZ 357 has a net charge of 0.2000 !!! WARNING: ARG 365 has a net charge of 0.0400 !!! WARNING: GLN 369 has a net charge of 0.0170 !!! WARNING: ASP 385 has a net charge of -0.2080 !!! WARNING: LYS 442 has a net charge of 0.0200 !!! WARNING: GLN 448 has a net charge of 0.0170 !!! WARNING: LYS 454 has a net charge of 0.0200 !!! WARNING: ARG 601 has a net charge of 0.0400 !!! WARNING: HEM 1107 has a net charge of -4.0000 End of MakeDOCK sphere and grid generation.