usefragsph not on
There are 38 ligand heavy atoms
Ligand center of coords (x y z): -47.0028684210526 12.2036052631579 16.6726052631579
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1521
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 934
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 930
Number of spheres polar: 282, nonpolar: 406, out of current total: 930
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -56.83991 -37.08205 2.25809 22.18526 6.67309 26.65063
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 522
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 462
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 398
Spheres center of coords (x y z): -47.6547800502512 14.5597312060301 16.2452577889447
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.41085414085045
Final number of output spheres is: 60
Number of polar spheres: 22
Number of nonpolar spheres: 30
Number of spheres that are near neither polar nor nonpolar receptor atoms: 8
Final number of spheres that are from crystallographic ligand: 38