usefragsph not on
There are 45 ligand heavy atoms
Ligand center of coords (x y z): 47.7373777777778 -8.27597777777778 9.25657777777777
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1445
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 917
WARNING: removing a crystallographic sphere that is distance 10.377816244278 angstroms from closest receptor atom
WARNING: removing a crystallographic sphere that is distance 11.645911600214 angstroms from closest receptor atom
WARNING: removing a crystallographic sphere that is distance 7.71895336169354 angstroms from closest receptor atom
WARNING: removing a crystallographic sphere that is distance 7.10345338550201 angstroms from closest receptor atom
WARNING: removing a crystallographic sphere that is distance 9.3138741133859 angstroms from closest receptor atom
WARNING: removing a crystallographic sphere that is distance 10.1322949522801 angstroms from closest receptor atom
WARNING: removing a crystallographic sphere that is distance 8.00342414220313 angstroms from closest receptor atom
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 908
Number of spheres polar: 226, nonpolar: 428, out of current total: 908
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 37.74712 57.50381 -18.19155 1.57192 -0.72961 19.20146
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 324
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 276
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 259
Spheres center of coords (x y z): 44.8756668339769 -8.71267455598455 9.9942866023166
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.78989614026486
Final number of output spheres is: 45
Number of polar spheres: 9
Number of nonpolar spheres: 28
Number of spheres that are near neither polar nor nonpolar receptor atoms: 8
Final number of spheres that are from crystallographic ligand: 38