There are 32 ligand heavy atoms Ligand center of coords (x y z): -0.140125 24.3759375 67.62375 Using crystallographic ligand as spheres for output Starting number of spheres from sph/sph cluster 0: 12914 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 8827 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 8827 Number of spheres polar: 4638, nonpolar: 3027, out of current total: 8827 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -12.13520 11.84040 12.39480 36.36560 55.62800 79.56800 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 1074 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 722 Crystallographic spheres are present, so doing continuity based on crystallographic spheres After continuity checking, number of spheres is: 718 Spheres center of coords (x y z): -0.135156545961003 22.2964718662952 67.9418629526462 Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8) Average weighted-distance for final elimination is: 9.37426067328513 Final number of output spheres is: 120 Number of polar spheres: 57 Number of nonpolar spheres: 62 Number of spheres that are near neither polar nor nonpolar receptor atoms: 1 Final number of spheres that are from crystallographic ligand: 32