There are 20 ligand heavy atoms Ligand center of coords (x y z): 53.0402 127.7982005 54.8202 useligsph not on Starting number of spheres from sph/sph cluster 0: 1170 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 974 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 968 Number of spheres polar: 400, nonpolar: 409, out of current total: 968 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 41.18239 65.01533 117.01000 139.71490 42.82550 66.74905 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 352 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 272 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 53.0402 127.7982005 54.8202 Center point: 61 xyz: 53.38493 127.40092 54.56303 After continuity checking, number of spheres is: 226 Spheres center of coords (x y z): 54.7143378318584 131.452135 57.0411072123893 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 49.6749295592048 117.838866464996 56.8438725151252 Average weighted-distance for final elimination is: 33.9825114764339 Final number of output spheres is: 120 Number of polar spheres: 71 Number of nonpolar spheres: 34 Number of spheres that are near neither polar nor nonpolar receptor atoms: 15 Final number of spheres that are from crystallographic ligand: 0