usefragsph not on
There are 19 ligand heavy atoms
Ligand center of coords (x y z): 2.41578947368421 18.4075263157895 25.9406842105263
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1546
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 849
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 849
Number of spheres polar: 279, nonpolar: 416, out of current total: 849
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -7.55799 12.21788 8.54630 28.40294 15.95430 35.66547
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 274
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 227
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 160
Spheres center of coords (x y z): 2.4511830625 20.5968431875 21.4520555
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.38693564009092
Final number of output spheres is: 45
Number of polar spheres: 19
Number of nonpolar spheres: 21
Number of spheres that are near neither polar nor nonpolar receptor atoms: 5
Final number of spheres that are from crystallographic ligand: 19