usefragsph not on
There are 11 ligand heavy atoms
Ligand center of coords (x y z): 1.60727272727273 17.3515454545455 26.9925454545455
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1131
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 714
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 714
Number of spheres polar: 348, nonpolar: 281, out of current total: 714
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -8.38283 9.45020 7.36863 27.22484 17.04793 36.92947
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 348
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 292
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 159
Spheres center of coords (x y z): 2.97299767295597 19.373425345912 23.1021511320755
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.84867703301939
Final number of output spheres is: 60
Number of polar spheres: 32
Number of nonpolar spheres: 27
Number of spheres that are near neither polar nor nonpolar receptor atoms: 1
Final number of spheres that are from crystallographic ligand: 11