usefragsph not on
There are 11 ligand heavy atoms
Ligand center of coords (x y z): 53.791 47.6862727272727 26.47
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1065
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 726
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 726
Number of spheres polar: 311, nonpolar: 303, out of current total: 726
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 43.84512 63.76586 38.60000 57.64002 17.02341 36.44600
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 262
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 190
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 154
Spheres center of coords (x y z): 55.5158327922078 50.681452922078 29.067223961039
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 8.29707318317388
Final number of output spheres is: 45
Number of polar spheres: 29
Number of nonpolar spheres: 13
Number of spheres that are near neither polar nor nonpolar receptor atoms: 3
Final number of spheres that are from crystallographic ligand: 11