usefragsph not on
There are 11 ligand heavy atoms
Ligand center of coords (x y z): -15.38 7.46136363636364 52.6157272727273
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1213
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 690
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 690
Number of spheres polar: 308, nonpolar: 289, out of current total: 690
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -25.36834 -5.38802 -1.80200 17.45443 42.84114 62.58965
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 245
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 183
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 103
Spheres center of coords (x y z): -17.0765154368932 8.59289961165048 56.3086499029126
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.7683698996904
Final number of output spheres is: 45
Number of polar spheres: 23
Number of nonpolar spheres: 18
Number of spheres that are near neither polar nor nonpolar receptor atoms: 4
Final number of spheres that are from crystallographic ligand: 11