usefragsph not on
There are 25 ligand heavy atoms
Ligand center of coords (x y z): 66.88412 -45.79548 97.30352
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1390
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 832
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 828
Number of spheres polar: 271, nonpolar: 388, out of current total: 828
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 56.91941 76.80722 -55.78569 -35.83675 89.17982 107.20507
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 277
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 226
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 171
Spheres center of coords (x y z): 66.3182024561404 -42.596928245614 101.714393859649
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.87968700753001
Final number of output spheres is: 45
Number of polar spheres: 19
Number of nonpolar spheres: 23
Number of spheres that are near neither polar nor nonpolar receptor atoms: 3
Final number of spheres that are from crystallographic ligand: 25