usefragsph not on
There are 25 ligand heavy atoms
Ligand center of coords (x y z): 67.36328 -45.99792 97.79336
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1409
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 755
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 755
Number of spheres polar: 323, nonpolar: 301, out of current total: 755
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 57.38205 77.23404 -55.98400 -36.00552 88.22588 107.77682
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 385
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 330
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 257
Spheres center of coords (x y z): 67.6251240077821 -46.1782933463035 101.022268832685
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.66337595082103
Final number of output spheres is: 60
Number of polar spheres: 32
Number of nonpolar spheres: 21
Number of spheres that are near neither polar nor nonpolar receptor atoms: 7
Final number of spheres that are from crystallographic ligand: 25