There are 19 ligand heavy atoms Ligand center of coords (x y z): 14.7145789473684 11.2302105263158 57.6372105263158 Using crystallographic ligand as spheres for output Starting number of spheres from sph/sph cluster 0: 12655 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 9574 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 9574 Number of spheres polar: 5852, nonpolar: 2970, out of current total: 9574 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 2.73480 26.71320 -0.76660 23.19440 45.70160 69.62580 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 1249 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 630 Crystallographic spheres are present, so doing continuity based on crystallographic spheres After continuity checking, number of spheres is: 614 Spheres center of coords (x y z): 17.7945459283388 9.19512475570032 59.664342019544 Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8) Average weighted-distance for final elimination is: 11.0469276923164 Final number of output spheres is: 120 Number of polar spheres: 79 Number of nonpolar spheres: 34 Number of spheres that are near neither polar nor nonpolar receptor atoms: 7 Final number of spheres that are from crystallographic ligand: 19