There are 20 ligand heavy atoms Ligand center of coords (x y z): -1.1363 8.95225 42.4307 useligsph not on Starting number of spheres from sph/sph cluster 0: 1420 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 993 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 993 Number of spheres polar: 238, nonpolar: 649, out of current total: 993 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -13.11907 10.82537 -3.03005 20.92086 30.59565 54.28618 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 342 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 247 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -1.1363 8.95225 42.4307 Center point: 39 xyz: -0.52837 8.29894 42.25903 After continuity checking, number of spheres is: 180 Spheres center of coords (x y z): 3.48235222222222 9.53083461111111 41.4435557222222 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 1.94438398115429 2.34704122497056 39.8417758146841 Average weighted-distance for final elimination is: 25.2070563366725 Final number of output spheres is: 120 Number of polar spheres: 32 Number of nonpolar spheres: 82 Number of spheres that are near neither polar nor nonpolar receptor atoms: 6 Final number of spheres that are from crystallographic ligand: 0