usefragsph not on
There are 20 ligand heavy atoms
Ligand center of coords (x y z): 15.7197 -0.3637 39.2213
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1592
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 684
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 684
Number of spheres polar: 106, nonpolar: 531, out of current total: 684
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 5.72441 25.61964 -10.34489 9.56968 29.23204 47.47036
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 346
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 300
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 257
Spheres center of coords (x y z): 12.4848384824903 -0.474873579766536 38.6018704280155
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.95288046029738
Final number of output spheres is: 60
Number of polar spheres: 12
Number of nonpolar spheres: 46
Number of spheres that are near neither polar nor nonpolar receptor atoms: 2
Final number of spheres that are from crystallographic ligand: 20