Distance from surface specified: 1.80 There are 33 ligand heavy atoms Ligand center of coords (x y z): 15.3807272727273 2.56254545454545 38.0457575757576 Using crystallographic ligand as spheres for output Starting number of spheres from sph/sph cluster 0: 21532 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (14 angstroms): 14690 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<2 angstroms): 14439 Number of spheres polar: 6353, nonpolar: 6236, out of current total: 14439 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 1.38480 29.37100 -11.43580 16.56100 24.04800 52.04120 Number of spheres after removing spheres too close to each other (approximately <1.4 angstroms): 1772 Number of spheres after second pass removing spheres absolutely <0.9 from each other: 782 Crystallographic spheres are present, so doing continuity based on crystallographic spheres After continuity checking, number of spheres is: 424 Spheres center of coords (x y z): 10.4368948113208 -1.47499150943396 40.0934589622641 Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8) Average weighted-distance for final elimination is: 8.95406639197303 Final number of output spheres is: 200 Number of polar spheres: 75 Number of nonpolar spheres: 113 Number of spheres that are near neither polar nor nonpolar receptor atoms: 12 Final number of spheres that are from crystallographic ligand: 33