There are 33 ligand heavy atoms Ligand center of coords (x y z): 15.3807272727273 2.56254545454545 38.0457575757576 Using crystallographic ligand as spheres for output Starting number of spheres from sph/sph cluster 0: 21532 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 11019 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 11019 Number of spheres polar: 4882, nonpolar: 4710, out of current total: 11019 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 3.38280 27.37600 -9.42740 14.55960 26.05240 50.04540 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 1486 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 509 Crystallographic spheres are present, so doing continuity based on crystallographic spheres After continuity checking, number of spheres is: 352 Spheres center of coords (x y z): 10.78855625 -0.228507954545455 39.5631823863636 Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8) Average weighted-distance for final elimination is: 7.63731225667804 Final number of output spheres is: 120 Number of polar spheres: 27 Number of nonpolar spheres: 90 Number of spheres that are near neither polar nor nonpolar receptor atoms: 3 Final number of spheres that are from crystallographic ligand: 33