usefragsph not on
There are 28 ligand heavy atoms
Ligand center of coords (x y z): 18.3393214285714 18.6059285714286 13.3839642857143
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2043
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1068
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1068
Number of spheres polar: 205, nonpolar: 748, out of current total: 1068
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 8.34656 28.29935 8.69372 28.60500 3.45327 23.20955
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 508
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 433
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 405
Spheres center of coords (x y z): 14.8982747654321 20.5747927407408 12.2201839012346
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.20295051063116
Final number of output spheres is: 60
Number of polar spheres: 15
Number of nonpolar spheres: 44
Number of spheres that are near neither polar nor nonpolar receptor atoms: 1
Final number of spheres that are from crystallographic ligand: 28