usefragsph not on
There are 25 ligand heavy atoms
Ligand center of coords (x y z): 30.58964 0.91744 27.19268
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2061
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1046
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1046
Number of spheres polar: 274, nonpolar: 685, out of current total: 1046
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 20.60394 40.54154 -9.07950 10.57944 17.23325 37.18956
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 509
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 433
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 390
Spheres center of coords (x y z): 26.2153228205128 0.633865871794872 27.7192512820513
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.73110161438894
Final number of output spheres is: 60
Number of polar spheres: 27
Number of nonpolar spheres: 32
Number of spheres that are near neither polar nor nonpolar receptor atoms: 1
Final number of spheres that are from crystallographic ligand: 25