usefragsph not on
There are 29 ligand heavy atoms
Ligand center of coords (x y z): 4.06989655172414 26.0574482758621 17.6073103448276
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1866
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1000
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1000
Number of spheres polar: 253, nonpolar: 587, out of current total: 1000
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -5.90987 13.84041 16.07864 36.04958 7.66268 27.58621
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 489
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 396
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 341
Spheres center of coords (x y z): 4.7878751026393 22.0048492375367 18.0297098533725
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.82016084635979
Final number of output spheres is: 60
Number of polar spheres: 24
Number of nonpolar spheres: 35
Number of spheres that are near neither polar nor nonpolar receptor atoms: 1
Final number of spheres that are from crystallographic ligand: 29