usefragsph not on
There are 31 ligand heavy atoms
Ligand center of coords (x y z): 4.65867741935484 26.8667096774193 17.8166451612903
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2087
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1108
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1108
Number of spheres polar: 219, nonpolar: 738, out of current total: 1108
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -5.20004 13.89019 16.87202 34.86105 7.84229 27.81266
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 302
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 247
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 214
Spheres center of coords (x y z): 5.22480570093458 23.3845161682243 17.2428618224299
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.62883448090675
Final number of output spheres is: 45
Number of polar spheres: 10
Number of nonpolar spheres: 33
Number of spheres that are near neither polar nor nonpolar receptor atoms: 2
Final number of spheres that are from crystallographic ligand: 31