Distance from surface specified: 1.80
There are 31 ligand heavy atoms
Ligand center of coords (x y z): 3.93567741935484 24.7775161290323 17.2002580645161
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 18084
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (14 angstroms): 13850
WARNING: removing a crystallographic sphere that is distance 1.53527489395222 angstroms from closest receptor atom
WARNING: removing a crystallographic sphere that is distance 1.62856317040513 angstroms from closest receptor atom
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<2 angstroms): 13844
Number of spheres polar: 5970, nonpolar: 6353, out of current total: 13844
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -10.06420 17.93480 10.77960 38.77660 3.20260 31.02000
Number of spheres after removing spheres too close to each other (approximately <1.4 angstroms): 1449
Number of spheres after second pass removing spheres absolutely <0.9 from each other: 728
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 615
Spheres center of coords (x y z): 2.08634471544715 19.891872195122 15.2122162601626
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 10.3463782433255
Final number of output spheres is: 200
Number of polar spheres: 75
Number of nonpolar spheres: 119
Number of spheres that are near neither polar nor nonpolar receptor atoms: 6
Final number of spheres that are from crystallographic ligand: 29