usefragsph not on
There are 23 ligand heavy atoms
Ligand center of coords (x y z): 46.3699565217391 12.9274347826087 0.57595652173913
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 931
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 611
WARNING: removing a crystallographic sphere that is distance 7.28713846444542 angstroms from closest receptor atom
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 609
Number of spheres polar: 208, nonpolar: 253, out of current total: 609
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 36.39108 55.83282 2.95154 21.31323 -6.33856 10.54987
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 329
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 292
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 278
Spheres center of coords (x y z): 47.1084794244604 11.1022144964029 0.722913381294964
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.34069451201288
Final number of output spheres is: 60
Number of polar spheres: 15
Number of nonpolar spheres: 29
Number of spheres that are near neither polar nor nonpolar receptor atoms: 16
Final number of spheres that are from crystallographic ligand: 22