usefragsph not on
There are 18 ligand heavy atoms
Ligand center of coords (x y z): 10.3665555555556 45.9999444444444 19.642
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 734
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 471
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 471
Number of spheres polar: 195, nonpolar: 199, out of current total: 471
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 0.40246 20.28457 36.00539 55.96649 11.42254 28.43673
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 255
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 217
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 201
Spheres center of coords (x y z): 12.2263520895522 45.7679999004975 17.2146569651741
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.78599892154619
Final number of output spheres is: 60
Number of polar spheres: 24
Number of nonpolar spheres: 31
Number of spheres that are near neither polar nor nonpolar receptor atoms: 5
Final number of spheres that are from crystallographic ligand: 18